aaron
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e8b8ab5985
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Added code to extend Matt's getReferenceBases out to the read walkers, so they can see the corresponding reference for each read.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@652 348d0f76-0448-11de-a6fe-93d51630548a
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2009-05-11 03:42:38 +00:00 |
hanna
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6e394490cb
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Cleanup in preparation for ByLoci traversal. Also did some work minimizing unit tests.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@643 348d0f76-0448-11de-a6fe-93d51630548a
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2009-05-08 21:27:54 +00:00 |
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hanna
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483a58627b
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More cleanup -- pushing shared functions down into the traversal engine.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@639 348d0f76-0448-11de-a6fe-93d51630548a
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2009-05-08 14:12:45 +00:00 |
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aaron
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5136724884
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Added code to the schedulers, one step closer to turning on the new reads traversals
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@613 348d0f76-0448-11de-a6fe-93d51630548a
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2009-05-06 22:36:25 +00:00 |
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aaron
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f5880109a7
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Added TraverseReads test, some bug fixes discovered in the traversal test
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@594 348d0f76-0448-11de-a6fe-93d51630548a
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2009-05-05 20:36:00 +00:00 |
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aaron
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63403d32cd
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Changes to the interface to the simple data source rippled out to a bunch of files.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@572 348d0f76-0448-11de-a6fe-93d51630548a
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2009-04-30 20:35:56 +00:00 |
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aaron
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d4de68e260
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added changes for the readsTraversal to accomidate design changes
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@553 348d0f76-0448-11de-a6fe-93d51630548a
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2009-04-28 19:49:58 +00:00 |
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aaron
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395aaf48b0
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Added the new by reads traversal, still needs to be sewn into the micromanager code.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@551 348d0f76-0448-11de-a6fe-93d51630548a
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2009-04-28 17:55:08 +00:00 |