From fdc2789322e43ce00208c6d8ed4e1f88ed32e124 Mon Sep 17 00:00:00 2001
From: andrewk <andrewk@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Fri, 5 Feb 2010 19:52:50 +0000
Subject: [PATCH] Minor fix: removed use command that doesn't work in /bin/sh
 scripts.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2799 348d0f76-0448-11de-a6fe-93d51630548a
---
 perl/maf_annotation/annotate_single_maf.pl | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/perl/maf_annotation/annotate_single_maf.pl b/perl/maf_annotation/annotate_single_maf.pl
index be27aa992..34ef65b36 100755
--- a/perl/maf_annotation/annotate_single_maf.pl
+++ b/perl/maf_annotation/annotate_single_maf.pl
@@ -7,8 +7,7 @@ if (scalar(@ARGV) != 1) {
 
 my ($maf) = @ARGV;
 
-my $cmd = "use matlab && " .
-		      "matlab <<STOP\n" .
+my $cmd = "matlab <<STOP\n" .
           "addpath /home/radon00/lawrence/CancerGenomeAnalysis/trunk/matlab/mike" . "\n" .
           "addpath /home/radon00/lawrence/CancerGenomeAnalysis/trunk/matlab/seq" . "\n" .
           "addpath /home/radon00/lawrence/CancerGenomeAnalysis/trunk/matlab" . "\n" .