From fd1c72c15140762920524fd21b68de79041afb1e Mon Sep 17 00:00:00 2001 From: ebanks Date: Fri, 4 Sep 2009 15:40:06 +0000 Subject: [PATCH] Fixed package name git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1535 348d0f76-0448-11de-a6fe-93d51630548a --- .../sting/gatk/walkers/fasta/BamToFastqWalker.java | 2 +- .../gatk/walkers/fasta/FastaAlternateReferenceWalker.java | 2 +- .../sting/gatk/walkers/fasta/FastaReferenceWalker.java | 2 +- .../broadinstitute/sting/gatk/walkers/fasta/FastaSequence.java | 3 +-- 4 files changed, 4 insertions(+), 5 deletions(-) diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/BamToFastqWalker.java b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/BamToFastqWalker.java index 0c1772900..62f51070c 100755 --- a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/BamToFastqWalker.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/BamToFastqWalker.java @@ -1,4 +1,4 @@ -package org.broadinstitute.sting.playground.gatk.walkers.fasta; +package org.broadinstitute.sting.gatk.walkers.fasta; import org.broadinstitute.sting.gatk.walkers.ReadWalker; import org.broadinstitute.sting.gatk.walkers.WalkerName; diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaAlternateReferenceWalker.java b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaAlternateReferenceWalker.java index a036ee981..eaae05c6b 100755 --- a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaAlternateReferenceWalker.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaAlternateReferenceWalker.java @@ -1,4 +1,4 @@ -package org.broadinstitute.sting.playground.gatk.walkers.fasta; +package org.broadinstitute.sting.gatk.walkers.fasta; import org.broadinstitute.sting.gatk.contexts.AlignmentContext; import org.broadinstitute.sting.gatk.contexts.ReferenceContext; diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaReferenceWalker.java b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaReferenceWalker.java index be1c40d5c..408271e71 100755 --- a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaReferenceWalker.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaReferenceWalker.java @@ -1,4 +1,4 @@ -package org.broadinstitute.sting.playground.gatk.walkers.fasta; +package org.broadinstitute.sting.gatk.walkers.fasta; import org.broadinstitute.sting.gatk.contexts.AlignmentContext; import org.broadinstitute.sting.gatk.contexts.ReferenceContext; diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaSequence.java b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaSequence.java index 444497db3..ae7c859cb 100755 --- a/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaSequence.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/fasta/FastaSequence.java @@ -1,6 +1,5 @@ -package org.broadinstitute.sting.playground.gatk.walkers.fasta; +package org.broadinstitute.sting.gatk.walkers.fasta; -import org.broadinstitute.sting.utils.GenomeLoc; import org.broadinstitute.sting.utils.StingException; import java.io.PrintStream;