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Eric wins the prize for pointing out that doubles weren't valid command-line arguments. Made all primitive types parseable as command-line arguments. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@884 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
hanna 2009-06-02 22:41:10 +00:00
parent 107b5d73b5
commit fa93661133
1 changed files with 18 additions and 2 deletions
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20
java/src/org/broadinstitute/sting/utils/cmdLine/ParsingEngine.java
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@ -425,14 +425,30 @@ public class ParsingEngine {
} }
Boolean bool = new Boolean(b); Boolean bool = new Boolean(b);
return bool; return bool;
} else if (type == Byte.TYPE) {
Byte b = Byte.valueOf(str);
return b;
} else if (type == Short.TYPE) {
Short s = Short.valueOf(str);
return s;
} else if (type == Integer.TYPE) { } else if (type == Integer.TYPE) {
Integer in = Integer.valueOf(str); Integer in = Integer.valueOf(str);
return in; return in;
} else if (type == Long.TYPE) {
Long l = Long.valueOf(str);
return l;
} else if (type == Float.TYPE) { } else if (type == Float.TYPE) {
Float fl = Float.valueOf(str); Float fl = Float.valueOf(str);
return fl; return fl;
} } else if (type == Double.TYPE) {
else { Double db = Double.valueOf(str);
return db;
} else if (type == Character.TYPE) {
if( str.trim().length() != 1 )
throw new StingException("Unable to parse argument '" + str + "' into a character.");
Character c = str.trim().charAt(0);
return c;
} else {
Constructor ctor = null; Constructor ctor = null;
try { try {
ctor = type.getConstructor(String.class); ctor = type.getConstructor(String.class);