diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/poolseq/PowerBelowFrequencyWalker.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/poolseq/PowerBelowFrequencyWalker.java index 72e02aa27..651117cf6 100644 --- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/poolseq/PowerBelowFrequencyWalker.java +++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/poolseq/PowerBelowFrequencyWalker.java @@ -152,7 +152,7 @@ public class PowerBelowFrequencyWalker extends LocusWalker { } private double getSNPProportion(int alleles) { - return ((double)alleles)/numIndividuals; + return ((double)alleles)/(2*numIndividuals); }