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Default max variants is now 5000 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3966 348d0f76-0448-11de-a6fe-93d51630548a
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depristo 2010-08-07 13:58:32 +00:00
parent 80e31df40d
commit f4ffef4479
1 changed files with 1 additions and 1 deletions
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2
R/VariantRecalibratorReport/VariantRecalibratorReport.R
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@ -17,7 +17,7 @@ lociFile = args[4];
if (is.na(lociFile) | lociFile == "NA" ) { lociFile = "/home/radon01/kiran/scr1/projects/DataProcessingPaper/scratch/MarkBustedWEx.loci"; }
maxVariants = args[5];
if (is.na(maxVariants)) { maxVariants = -1; }
if (is.na(maxVariants)) { maxVariants = 5000; }
maxVariants = as.integer(maxVariants)
greedy = args[6]