diff --git a/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java b/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java index 2be70585d..359bbe6b3 100755 --- a/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java +++ b/java/src/org/broadinstitute/sting/gatk/traversals/TraversalEngine.java @@ -288,7 +288,7 @@ public abstract class TraversalEngine,Provide // else // logger.info(String.format("Processing %s", common)); logger.info(String.format("%15s %5.2e %s %s %4.1f%% %s %s", - loc == null ? "done" : loc, nRecords*1.0, elapsed, unitRate, + loc == null ? "done with mapped reads" : loc, nRecords*1.0, elapsed, unitRate, 100*fractionGenomeTargetCompleted, estTotalRuntime, timeToCompletion)); }