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Merge pull request #133 from broadinstitute/chartl_fix_validation_site_selector_md5s 

MathUtils.randomSubset() now uses Collections.shuffle() (indirectly, thr...
This commit is contained in:
MauricioCarneiro 2013-03-29 12:57:10 -07:00
parent ed98fc6a1f 74a17359a8
commit f42bdaee3c
1 changed files with 5 additions and 5 deletions
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10
protected/java/test/org/broadinstitute/sting/gatk/walkers/validation/ValidationSiteSelectorIntegrationTest.java
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@ -79,7 +79,7 @@ public class ValidationSiteSelectorIntegrationTest extends WalkerTest {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString(sampleNone + freqUnif + "--variant " + testfile),
1,
Arrays.asList("b8a988757ac1f206d123140da5a3e778")
Arrays.asList("658c70cbb93faed8ca18e51cd6dd593f")
);
executeTest("testNoSampleSelectionFreqUniform--" + testfile, spec);
@ -91,7 +91,7 @@ public class ValidationSiteSelectorIntegrationTest extends WalkerTest {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString(sampleNone + freqAF + "--variant " + testfile),
1,
Arrays.asList("542d5d5ff8c64da7b077bab4b950a9a3")
Arrays.asList("90411433ea42846352b767da735af53b")
);
executeTest("testNoSampleSelectionFreqAF--" + testfile, spec);
@ -103,7 +103,7 @@ public class ValidationSiteSelectorIntegrationTest extends WalkerTest {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString(sampleGT + freqUnif + "--variant " + testfile),
1,
Arrays.asList("7385b17eed7f4ff0f6e82e60c3334ce7")
Arrays.asList("2afabd447185cf017f60c85380902117")
);
executeTest("testPolyGTFreqUniform--" + testfile, spec);
@ -115,7 +115,7 @@ public class ValidationSiteSelectorIntegrationTest extends WalkerTest {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString(sampleGT + freqAF + "--variant " + testfile),
1,
Arrays.asList("0ee4a565a0d4f6b6942abd72a373becd")
Arrays.asList("381e1a2f0e1908b4d7cba5d6361cf5aa")
);
executeTest("testPolyGTFreqAF--" + testfile, spec);
@ -127,7 +127,7 @@ public class ValidationSiteSelectorIntegrationTest extends WalkerTest {
WalkerTestSpec spec = new WalkerTestSpec(
baseTestString(sampleGL + freqAF + "--variant " + testfile),
1,
Arrays.asList("0ee4a565a0d4f6b6942abd72a373becd")
Arrays.asList("381e1a2f0e1908b4d7cba5d6361cf5aa")
);
executeTest("testPolyGLFreqAF--" + testfile, spec);