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Appropriate build statements for 'MarkAllAlignmentsAsPrimary' and 'RepairSeattleBAM' - both one-off tools. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3341 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2010-05-10 15:17:51 +00:00
parent 13fd182b7c
commit f36726554f
1 changed files with 30 additions and 0 deletions
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30
build.xml
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@ -178,6 +178,24 @@
</manifest>
</jar>
<jar jarfile="${dist.dir}/MarkAllAlignmentsAsPrimary.jar" whenmanifestonly="skip">
<fileset dir="build">
<include name="**/*.class" />
</fileset>
<manifest>
<attribute name="Main-Class" value="org.broadinstitute.sting.oneoffprojects.tools.MarkAllAlignmentsAsPrimary" />
</manifest>
</jar>
<jar jarfile="${dist.dir}/RepairSeattleBAM.jar" whenmanifestonly="skip">
<fileset dir="build">
<include name="**/*.class" />
</fileset>
<manifest>
<attribute name="Main-Class" value="org.broadinstitute.sting.oneoffprojects.tools.RepairSeattleBAM" />
</manifest>
</jar>
<jar jarfile="${dist.dir}/VCFTool.jar" whenmanifestonly="skip">
<fileset dir="build">
<include name="**/*.class"/>
@ -222,6 +240,18 @@
<attribute name="Class-Path" value="${jar.classpath}" />
</manifest>
</jar>
<jar jarfile="${dist.dir}/MarkAllAlignmentsAsPrimary.jar" update="true" whenmanifestonly="skip">
<manifest>
<attribute name="Class-Path" value="${jar.classpath}" />
</manifest>
</jar>
<jar jarfile="${dist.dir}/RepairSeattleBAM.jar" update="true" whenmanifestonly="skip">
<manifest>
<attribute name="Class-Path" value="${jar.classpath}" />
</manifest>
</jar>
</target>
<target name="core" description="force a build of the Sting core code">