Attempt to reduce memory footprint of ValidationSiteSelector (if this doesn't work then a radical rewrite of the walker to make it two-pass will be necessary): don't log any attributes of original VCF, if we need chr counts later we can reannotate from original inputs. As things stand, we can't select SNP's genomewide due to memory usage.

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Guillermo del Angel 2011-11-14 14:56:09 -05:00

parent 509ecc62cc

commit f1db31f072

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