fix for a bug in package utils.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4060 348d0f76-0448-11de-a6fe-93d51630548a

java/src/org/broadinstitute/sting/utils/classloader/PackageUtils.java

@@ -123,6 +123,6 @@ public class PackageUtils {
     }
 
     public static Set<URL> getClassPathURLs() {
-        return ClasspathHelper.getUrlsForCurrentClasspath();
+        return ClasspathHelper.getUrlsForManifestsCurrentClasspath();
     }
 }