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Revert change until I figure out how to use classfileset/rootfileset 

with a vanilla ant install.

This reverts commit 4c9022872beec8dc0700a1320a267e3603c8212d.
This commit is contained in:
Matt Hanna 2011-10-06 10:08:48 -04:00
parent 55b9f06527
commit efca1fdfd8
1 changed files with 6 additions and 4 deletions
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10
build.xml
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@ -545,10 +545,12 @@
<target name="vcf.jar" depends="gatk.compile,init.jar">
<jar jarfile="${dist.dir}/vcf.jar">
<classfileset dir="${java.classes}">
<rootfileset dir="${java.classes}" includes="org/broadinstitute/sting/utils/codecs/vcf/**/*.class" />
<rootfileset dir="${java.classes}" includes="org/broadinstitute/sting/utils/variantcontext/**/*.class" />
</classfileset>
<fileset dir="${java.classes}">
<include name="**/utils/codecs/**/*.class"/>
<include name="**/utils/variantcontext/**/*.class"/>
<include name="org/broadinstitute/sting/utils/exceptions/**"/>
<include name="org/broadinstitute/sting/utils/help/DocumentedGATKFeature.class"/>
</fileset>
</jar>
</target>