From efa60e5de506f1e1db3bc41485161bb22fbeb7c1 Mon Sep 17 00:00:00 2001
From: aaron <aaron@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Fri, 25 Jun 2010 02:56:02 +0000
Subject: [PATCH] and add changes to the vcf used in testing

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3636 348d0f76-0448-11de-a6fe-93d51630548a
---
 testdata/vcf/vcfWithGenotypes.vcf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/testdata/vcf/vcfWithGenotypes.vcf b/testdata/vcf/vcfWithGenotypes.vcf
index 9bf4f4750..fca1f0fce 100644
--- a/testdata/vcf/vcfWithGenotypes.vcf
+++ b/testdata/vcf/vcfWithGenotypes.vcf
@@ -22,4 +22,4 @@
 20	1230237	.	T	.	47	PASS	NS=3;DP=13;AA=T	GT:GQ:DP:HQ	0|0:54:7:56,60	0|0:48:4:51,51	0/0:61:2
 20	1234567	microsat1	GTCT	G,GTACT	50	PASS	NS=3;DP=9;AA=G	GT:GQ:DP	0/1:35:4	0/2:17:2	1/1:40:3
 20	1234587	supersite	GGGG	G	50	PASS	NS=3;DP=9;AA=G	GT:GQ:DP	0/1:35:4	0/0:17:2	1/1:40:3
-22	17580633	.	ACNCCTAANCC	AC	100	PASS	NS=3;DP=9;AA=G	GT:GQ:HQ	0|0:48:1:51,51	1|0:48:8:51,51	1/1:43:5:.,.
\ No newline at end of file
+22	17580633	.	ACNCCTAANCC	AC	100	PASS	NS=3;DP=9;AA=G	GT:GQ:DP:HQ	0|0:48:1:51,51	1|0:48:8:51,51	1/1:43:5:.,.