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for now, set log error to -1 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3231 348d0f76-0448-11de-a6fe-93d51630548a
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asivache 2010-04-21 19:21:06 +00:00
parent e9e844fbf5
commit ef6d900eb8
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/walkers/genotyper/SimpleIndelCalculationModel.java
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@ -75,7 +75,7 @@ public class SimpleIndelCalculationModel extends GenotypeCalculationModel {
}
VariantContext vc = new VariantContext("UG_Indel_call", loc, alleles, new HashMap<String,Genotype>() /* genotypes */,
0.0 /* log error */, null /* filters */, null /* attributes */);
-1.0 /* log error */, null /* filters */, null /* attributes */);
vcc = new VariantCallContext(vc,true);
/*