From ee94af3539c44d7b245374d3a70c1580b1d864c2 Mon Sep 17 00:00:00 2001
From: depristo <depristo@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 14 Apr 2011 18:21:16 +0000
Subject: [PATCH] Oops, left out of earlier commit

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5640 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../oneoffprojects/walkers/AssessSimulatedPerformance.java      | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/AssessSimulatedPerformance.java b/java/src/org/broadinstitute/sting/oneoffprojects/walkers/AssessSimulatedPerformance.java
index a0d0a0f4d..844a16c3b 100755
--- a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/AssessSimulatedPerformance.java
+++ b/java/src/org/broadinstitute/sting/oneoffprojects/walkers/AssessSimulatedPerformance.java
@@ -86,7 +86,7 @@ public class AssessSimulatedPerformance extends RodWalker<Integer, Integer> {
 
     private void printVCFields(String name, RefMetaDataTracker tracker, ReferenceContext ref, AlignmentContext context) {
         VariantContext vc = tracker.getVariantContext(ref, name, null, context.getLocation(), true);
-        out.print(Utils.join("\t", VariantsToTable.extractFields(vc, fieldsToTake)));
+        out.print(Utils.join("\t", VariantsToTable.extractFields(vc, fieldsToTake, true)));
         out.print("\t");
     }