Merged bug fix from Stable into Unstable

2011-07-17 18:10:18 -04:00 · 2011-07-17 18:10:18 -04:00 · ecc8726f63
parent 35ec82a467 1af76736b9
commit ecc8726f63
1 changed files with 1 additions and 1 deletions
--- a/public/scala/src/org/broadinstitute/sting/queue/util/QScriptUtils.scala
+++ b/public/scala/src/org/broadinstitute/sting/queue/util/QScriptUtils.scala
@ -31,7 +31,7 @@ object QScriptUtils {
    for (bam <- fromFile(in).getLines)
      if (!bam.startsWith("#") && !bam.isEmpty )
        list :+= new File(bam.trim())
-    list
+    list.sortWith(_.compareTo(_) < 0)
  }

  /**