From ec94cfdf0580173506945533f59e01ab6e9e5f41 Mon Sep 17 00:00:00 2001 From: aaron Date: Fri, 16 Jul 2010 14:33:25 +0000 Subject: [PATCH] remove unit test for VCF writer, it's not applicable now that we produce only VCF4. Guillermo, it's up to you if you want to adapt this or remove it. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3803 348d0f76-0448-11de-a6fe-93d51630548a --- .../sting/utils/genotype/vcf/VCFWriterUnitTest.java | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/java/test/org/broadinstitute/sting/utils/genotype/vcf/VCFWriterUnitTest.java b/java/test/org/broadinstitute/sting/utils/genotype/vcf/VCFWriterUnitTest.java index 3e183a9bc..a2c2b4027 100644 --- a/java/test/org/broadinstitute/sting/utils/genotype/vcf/VCFWriterUnitTest.java +++ b/java/test/org/broadinstitute/sting/utils/genotype/vcf/VCFWriterUnitTest.java @@ -34,8 +34,12 @@ public class VCFWriterUnitTest extends BaseTest { GenomeLocParser.setupRefContigOrdering(seq); } - /** test, using the writer and reader, that we can output and input a VCF file without problems */ @Test + public void emptyTest() { + } + + /** test, using the writer and reader, that we can output and input a VCF file without problems */ + //@Test public void testBasicWriteAndRead() { VCFHeader header = createFakeHeader(metaData,additionalColumns); VCFWriter writer = new VCFWriter(fakeVCFFile); @@ -53,7 +57,7 @@ public class VCFWriterUnitTest extends BaseTest { Assert.assertEquals(2,counter); reader.close(); new File(fakeVCFFile + TribbleRMDTrackBuilder.linearIndexExtension).delete(); - fakeVCFFile.delete(); + //fakeVCFFile.delete(); } /**