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Merged bug fix from Stable into Unstable

This commit is contained in:
Eric Banks 2011-09-27 20:35:18 -04:00
parent 232a6df11c 43b0c98298
commit eacbee3fe5
1 changed files with 2 additions and 2 deletions
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4
public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java
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@ -92,7 +92,7 @@ import java.util.*;
* -o output.vcf \ * -o output.vcf \
* -sn SAMPLE_1_PARC \ * -sn SAMPLE_1_PARC \
* -sn SAMPLE_1_ACTG \ * -sn SAMPLE_1_ACTG \
* -sn 'SAMPLE.+PARC' * -se 'SAMPLE.+PARC'
* *
* Select any sample that matches a regular expression and sites where the QD annotation is more than 10: * Select any sample that matches a regular expression and sites where the QD annotation is more than 10:
* java -Xmx2g -jar GenomeAnalysisTK.jar \ * java -Xmx2g -jar GenomeAnalysisTK.jar \
@ -100,7 +100,7 @@ import java.util.*;
* -T SelectVariants \ * -T SelectVariants \
* --variant input.vcf \ * --variant input.vcf \
* -o output.vcf \ * -o output.vcf \
* -sn 'SAMPLE.+PARC' * -se 'SAMPLE.+PARC'
* -select "QD > 10.0" * -select "QD > 10.0"
* *
* Select a sample and exclude non-variant loci and filtered loci: * Select a sample and exclude non-variant loci and filtered loci: