From 43b0c98298ddf234a403195ebc76530ce99ad185 Mon Sep 17 00:00:00 2001 From: Eric Banks Date: Tue, 27 Sep 2011 20:34:46 -0400 Subject: [PATCH] Fix docs --- .../sting/gatk/walkers/variantutils/SelectVariants.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java index 018c4dcc2..459ffb75e 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java @@ -92,7 +92,7 @@ import java.util.*; * -o output.vcf \ * -sn SAMPLE_1_PARC \ * -sn SAMPLE_1_ACTG \ - * -sn 'SAMPLE.+PARC' + * -se 'SAMPLE.+PARC' * * Select any sample that matches a regular expression and sites where the QD annotation is more than 10: * java -Xmx2g -jar GenomeAnalysisTK.jar \ @@ -100,7 +100,7 @@ import java.util.*; * -T SelectVariants \ * --variant input.vcf \ * -o output.vcf \ - * -sn 'SAMPLE.+PARC' + * -se 'SAMPLE.+PARC' * -select "QD > 10.0" * * Select a sample and exclude non-variant loci and filtered loci: