diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java index bf9a3b03e..9b625fb04 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java @@ -92,7 +92,7 @@ import java.util.*; * -o output.vcf \ * -sn SAMPLE_1_PARC \ * -sn SAMPLE_1_ACTG \ - * -sn 'SAMPLE.+PARC' + * -se 'SAMPLE.+PARC' * * Select any sample that matches a regular expression and sites where the QD annotation is more than 10: * java -Xmx2g -jar GenomeAnalysisTK.jar \ @@ -100,7 +100,7 @@ import java.util.*; * -T SelectVariants \ * --variant input.vcf \ * -o output.vcf \ - * -sn 'SAMPLE.+PARC' + * -se 'SAMPLE.+PARC' * -select "QD > 10.0" * * Select a sample and exclude non-variant loci and filtered loci: