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Filter lists can now end with .list or .txt. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3084 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kshakir 2010-03-27 17:41:24 +00:00
parent 074ec77dcc
commit e9e53f68ab
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/filters/ReadGroupBlackListFilter.java
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@ -53,7 +53,7 @@ public class ReadGroupBlackListFilter implements SamRecordFilter {
}
private void addFilter(Map<String, Collection<String>> filters, String filter, File parentFile, int parentLineNum) {
if (filter.toLowerCase().endsWith(".txt")) {
if (filter.toLowerCase().endsWith(".list") || filter.toLowerCase().endsWith(".txt")) {
File file = new File(filter);
try {
int lineNum = 0;