Adding HC GGA integration test to cover duplicated input alleles.

2013-01-11 15:01:27 -05:00 · 2013-01-11 15:01:27 -05:00 · e952296c10
parent 7f7f40f851
commit e952296c10
1 changed files with 1 additions and 1 deletions
--- a/protected/java/test/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java
+++ b/protected/java/test/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java
@ -95,7 +95,7 @@ public class HaplotypeCallerIntegrationTest extends WalkerTest {

    @Test
    public void testHaplotypeCallerMultiSampleGGAMultiAllelic() {
-        HCTestComplexGGA(CEUTRIO_BAM, "-L 20:133041-133161",
+        HCTestComplexGGA(CEUTRIO_BAM, "-L 20:133041-133161 -L 20:300207-300337",
                "bbbbd25b22a551cae5d70ea30d7feed1");
    }