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Added flush() method to VCFWriters 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4533 348d0f76-0448-11de-a6fe-93d51630548a
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fromer 2010-10-20 20:23:22 +00:00
parent 00726b6c4b
commit e8079399ac
2 changed files with 9 additions and 1 deletions
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4
java/src/org/broadinstitute/sting/gatk/io/storage/VCFWriterStorage.java
View File

@ -95,6 +95,10 @@ public class VCFWriterStorage implements Storage<VCFWriterStorage>, VCFWriter {
writer.close(); writer.close();
} }
public void flush() {
writer.flush();
}
/** /**
* Merges the stream backing up this temporary storage into the target. * Merges the stream backing up this temporary storage into the target.
* @param target Target stream for the temporary storage. May not be null. * @param target Target stream for the temporary storage. May not be null.

4
java/src/org/broadinstitute/sting/gatk/io/stubs/VCFWriterStub.java
View File

@ -184,6 +184,10 @@ public class VCFWriterStub implements Stub<VCFWriter>, VCFWriter {
outputTracker.getStorage(this).close(); outputTracker.getStorage(this).close();
} }
public void flush() {
outputTracker.getStorage(this).flush();
}
/** /**
* Gets a string representation of this object. * Gets a string representation of this object.
* @return * @return