diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorEngine.java b/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorEngine.java
index 0521dd228..a2c231f50 100755
--- a/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorEngine.java
+++ b/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotatorEngine.java
@@ -141,11 +141,11 @@ public class VariantAnnotatorEngine {
         for ( GenotypeAnnotation annotation : requestedGenotypeAnnotations )
             descriptions.add(annotation.getDescription());
         if ( annotateDbsnp )
-            descriptions.add(new VCFInfoHeaderLine(VCFRecord.DBSNP_KEY, 1, VCFInfoHeaderLine.INFO_TYPE.Integer, "dbSNP membership"));
+            descriptions.add(new VCFInfoHeaderLine(VCFRecord.DBSNP_KEY, 1, VCFInfoHeaderLine.INFO_TYPE.Integer, "dbSNP Membership"));
         if ( annotateHapmap2 )
-            descriptions.add(new VCFInfoHeaderLine(VCFRecord.HAPMAP2_KEY, 1, VCFInfoHeaderLine.INFO_TYPE.Integer, "Hapmap 2 membership"));
+            descriptions.add(new VCFInfoHeaderLine(VCFRecord.HAPMAP2_KEY, 1, VCFInfoHeaderLine.INFO_TYPE.Integer, "Hapmap 2 Membership"));
         if ( annotateHapmap3 )
-            descriptions.add(new VCFInfoHeaderLine(VCFRecord.HAPMAP3_KEY, 1, VCFInfoHeaderLine.INFO_TYPE.Integer, "Hapmap 3 membership"));
+            descriptions.add(new VCFInfoHeaderLine(VCFRecord.HAPMAP3_KEY, 1, VCFInfoHeaderLine.INFO_TYPE.Integer, "Hapmap 3 Membership"));
 
         return descriptions;
     }
diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelRealigner.java b/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelRealigner.java
index a8734617c..1f0aaf551 100755
--- a/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelRealigner.java
+++ b/java/src/org/broadinstitute/sting/gatk/walkers/indels/IndelRealigner.java
@@ -587,6 +587,7 @@ public class IndelRealigner extends ReadWalker<Integer, Integer> {
                     } catch (Exception e) {}
                 }
             } else {
+                //System.out.println("CLEAN: " + AlignmentUtils.cigarToString(bestConsensus.cigar) + " " + bestConsensus.str.toString() + " " + bestConsensus.cigar.numCigarElements() );
                 //logger.debug("CLEAN: " + AlignmentUtils.cigarToString(bestConsensus.cigar) + " " + bestConsensus.str );
                 if ( indelOutput != null && bestConsensus.cigar.numCigarElements() > 1 ) {
                     // NOTE: indels are printed out in the format specified for the low-coverage pilot1