zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

Forgot to add the note about length normalization to the QD docs

This commit is contained in:
Eric Banks 2013-01-10 23:34:06 -05:00
parent ff5ac986d8
commit e4b7b1955c
1 changed files with 1 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
protected/java/src/org/broadinstitute/sting/gatk/walkers/annotator/QualByDepth.java
View File

@ -68,7 +68,7 @@ import java.util.List;
import java.util.Map;
/**
* Variant confidence (from the QUAL field) / unfiltered depth of non-reference samples.
* Variant confidence (from the QUAL field) / unfiltered depth of non-reference samples. Note that the QD is also normalized by event length.
*
* Low scores are indicative of false positive calls and artifacts. Note that QualByDepth requires sequencing
* reads associated with the samples with polymorphic genotypes.