diff --git a/java/src/org/broadinstitute/sting/gatk/refdata/PlinkRod.java b/java/src/org/broadinstitute/sting/gatk/refdata/PlinkRod.java index 49938141e..d17eb5a0b 100644 --- a/java/src/org/broadinstitute/sting/gatk/refdata/PlinkRod.java +++ b/java/src/org/broadinstitute/sting/gatk/refdata/PlinkRod.java @@ -19,7 +19,7 @@ public class PlinkRod extends BasicReferenceOrderedDatum implements Iterator headerEntries = new HashSet(Arrays.asList("#Family ID","Individual ID","Sex", - "Paternal ID","Maternal ID","Phenotype", "FID","IID","PAT","MAT","SEX","PHENOTYPE")); + "Paternal ID","Maternal ID","Phenotype", "FID","IID","PAT","MAT","SEX","PHENOTYPE","#Individual ID")); private final byte SNP_MAJOR_MODE = 1; private PlinkVariantInfo currentVariant;