From e27951ab397351dd9feebae0b57d31d4afc161fa Mon Sep 17 00:00:00 2001
From: aaron <aaron@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Thu, 10 Jun 2010 20:18:34 +0000
Subject: [PATCH] re-updating the VCF code to handle spaces in sample names

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3528 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../{tribble-100.jar => tribble-102.jar}      | Bin 221974 -> 221973 bytes
 .../{tribble-100.xml => tribble-102.xml}      |   2 +-
 2 files changed, 1 insertion(+), 1 deletion(-)
 rename settings/repository/org.broad/{tribble-100.jar => tribble-102.jar} (94%)
 rename settings/repository/org.broad/{tribble-100.xml => tribble-102.xml} (64%)

diff --git a/settings/repository/org.broad/tribble-100.jar b/settings/repository/org.broad/tribble-102.jar
similarity index 94%
rename from settings/repository/org.broad/tribble-100.jar
rename to settings/repository/org.broad/tribble-102.jar
index bd88648483fe2473c4a3add7702dcb69c308b02e..89c36296bb97946c14aebe3d43b5de6600e1989e 100644
GIT binary patch
delta 2028
zcmYjSdr(wW7{BLy%d+gcuq$E<jA;S_F-%G#o02H<T3)-n7j}hZ^D%^vP0b9OG#f{-
z@ikYvQcd6}Hsv@nt$DL?geeEq&;d2G2b%wAp&3zWQ)!*^-DBgOxpRN}`+e{4+`Vu2
zo7?-%W>*pDj1s@TdhOgEa}r!;4|_XYVvnJz_!v*%q#Q$1`Ojb>dvYMR=pG=^5^|a%
zSZH{igfk`6-kGp@7$j*Jlp6=AO}0R2@J`q*&FzZWj@H(2w-Lb#+ab+ADt4m|{p-88
zpV+CBq@6l>LAy;3SWR-*G?Nl20DbV{)O|XvXJz~>bl)HUoCU$i>|V;1U}wfe6M|#e
zJIvvX$=pzUtvAacNm&NjwT9J`F){e6%V|KjFWomMa3BwT6emYC>*bN9T3w?{-6#Ze
z*9=6UMZ}g2ba8B1hrI;*wl2|{N^F~p%91vt7WJh)t(x-B-Z`kGw|`(laJ}np7zZrh
zvq<O<uh;tDbVRR#)}tMvXp-0#r}Vkt@ij5eV52&Q1qCYyzMHO19BTGmj+CU!k;;ve
z)W)4`!Ih)8BQb;Lp-0aLqMXo?bk3;1>PQuqqdF{P4fd;^iXjHHSI?%Bev6gaWzLNr
zYpWrW#P1Y&|I{d@>q%lzj%E>)dS*UZPON;qyY8>7xWkSRzf;l5l20ZnO$!K~5VdI`
z@#`?}g<R5&b5YkjNKXhaN=<f>NZgm2RY#7^#6s_FCu!)A@)qgFUe!zQka2<zXWk=g
z0nz*}(r-n((2q%z8PVEaGKzaseS^fNd2BpS!lt3ewx7w}P(&O4ATLKD8Z**gba+k%
zf>GAhR!LfIm3y;oN>3aOS9V*eQJrF;o3uooPtn_2&>eAf>!YI>r&!XcPRUH7Mhxjl
zqRX_|e0r#_WzZ~1{EpXVlSV_8AupKZ!);;eSTa3tMxVY6>eot3$f7=NHmx}{pv~rQ
zC!LGgRC^`u*3=(rsax}%x16SFYM`0cYwB=-l2kL_Piy$`hdm*Z)T3;6kZ4}2S(*7E
z@688#HTr$}ndWij01cmrwcPrI-oYcIUO7qkYii5qbSw<VbnfWP{^S{wlstpKPU`MK
z`mG75cb&TGDqR(W0j`hJ5Y6q@eLA5S*uRT%ZxPtJsLaZNEWRscZ4NwxpgRZBQ5wmC
z=aHF`3pEH{$%R4$r*pxHU~(RmBWTV87lKoHP=FvT9~L8M%7<kLF6Kieg5(0I#S~i$
zU?DPR3q-(J2b7_-+5vS41|8r*@N^+mq4AbNQP1~<un3vyMNolYLy@o<DuR4uVv0rf
zH;ciK%#X#Qi}Vs`M5dzzUO@0~3FILtC}kD$u^cRA**RdjVwEXQNYZpClp^SO1V)`A
zbGA!_-{pd4w0YnXF+63WguXJCnU6od9CFcSML9GfxLPiZ=TyLp$Q-B;gJjdIMlWwA
zxKUCoh4e%fc#&CO1@&n2brtKIr&v%eygI5O8*Q#ti}~4Wz=t;P)<6S-2Q_T`yxlUl
z7{C!X+XH8ewQSWqU_&h{goER?Vnva40tD(<&0HF(6J5;ni0pektW+-j?qNIU!0r{y
zJ}+B7XGXmuPX1z1e9vORnCn@C+-60+DD^_UkWv~1Xl)R^|J1<d!;N!%g6a0L<H?yn
zeWG}0BijXMjx~ZCU(NqtB_-MqMbns;IVoXw*B9*T$L~b`Wfs@LH-^WRMjty7fpt``
hMEph#$`L<Iz<?+H5KF(g|Cs)lA13Q>E@Gcy=|3w|N4x+4

delta 2029
zcmYk7e^69a6vyAaXIU1O#a)nQfyy6<pbV3d1QEF*KbK#-zyixIF3b8WC1k}P8P4R7
z$q{VSoEJTEnp{(CCT(<D^<`ODHmIYfm_v=J<v*G~GQv@s$*g<NyEeU<H}A9GbIv{I
z+;iW)-a*s5gC>)+0(8+5zb4N;wat_clh`A-7a!**;A1oum`zS1nfzzCoIN?nUAn(f
z=!*E3A`}?jAhFDnpSvS<?GQ-P5GdDnQLAi*$nc%08(P?~DHpvhvF>PuSFL-r_=M!u
zI*j-AZ#uF?CrMj$^2@zeIcPD;p@~MNqYU)n3lsWuSWo+uXEA)|lo!khS7r`SZVB(m
zi8CS`oW0o;%ar_8l~)IB21&9RWM?O<Cnqlay3=96u+#4AF&yOcAE(IU+Vt|3`C47K
z=DX1lF77-r4n4-L&%qG;`sLV5_}GSdT2pB~d1#r}6RoYfbX&J(dHBxrXvyyV$cXTB
z=x!7TmhU+f^m|uo{jd2%uR-_z_af0HttUkpse%8GiA9E6)e$Tx>^kw&WNpWxvF~EM
zBwdVGt{tUT9%K!--?|--8N83YdJf7F9m(dP{-GoFSdMBplTPec{VItV&|f{3Ne0ap
z=9izBIMUNdB#GY{^3DkfO6X}~Q1;u1Q9U_}EF|c)b*#Pa4m(2p&O|SBDH*SXTo9=Q
zUnUPQ<)Q)-&>?+SO!{$i)RlH}AOf{%4ic{wWb=@NGx+$F2b)M18Z+J^{n)Vj{dO`+
zP&@fPSq9uqofRU37Stj?C5uc*%Ld3T9G>bwL#zb-R-YwN6OlIlM(#!;t-4QEBp{7M
z)8BP?SWbi!EFBg}>afTIv#m<V16K7ZGhL(Q*fELT*4EpcLN`1<iYbaYi|Um8bQ+DT
z+0*F)V&O;cvpvVU&X^>L-&3@`$)b_Uxn?lRdwZhPk!kd-31g1s(12D|s*U<1Q0p$D
zK|IUqUk;jw+0<MY?bocoG*Pz}`{F{HrCEb*)Tdd8f|O*Mcn#gLhaVk?kfa03T02Qp
zg7;~%vegfIHSq)bx#m2)i^j%b${UC19X-<UQMyyJc6~!fqHuHWWh_mbK2?&YPvvit
z`t})m$*6<oWf^Mwk90{A#$6qy5n9~!F&b0JHRXOG;A^kUC;}TFk<wWN&minBf^77;
zTm&zn@?<eIBCITia)jf>;6O+yfm(#cCE!H(vINQy45cs!;gwQYfG|`FE`;<lXu=e4
zmO%k3C(FcwNp`3~(-J#)5Kh~{i!iMm>d|>!xu}OYAX#}(4)`~zOsar7w7*s%9M4ri
zDJqGTqJ;I85J08C$wFzB=y_%pw4&Ts1#=M|RY3_tX*H{rZ_uu4RtE=`wNNuTpc<j?
zG2C>B%xrmWr?xnu4SgOuMYyL%lrT^ulBU!`G5WOC!XktpYK3!l9V|xW!#c5>)CCQw
zcwOK|IP4OpC+eXYl@;~iLl~|XecKvX6d!zF1I$L#l?JhiIgQ{)WqTvEpwGibHUr+N
z(=B@6=Vrs;N>me@H($rs#AeCiP?MNboJT;1ht<qYmp!73Jg>+uds(U6bkEBM&mpH-
zC`vOs0bIG+EY>NR!;0t1{y9R4@v#QE(&iJTp7jaS^cDddTUhVh=hqgtKO74ELfP$S
zXOt^reo=gNE1LyZ!mZ%Ock{m&O0fo@Vj{EUk58Q$I?g_S{7&PaW^wIacVSfd+Rx5W
pa5>d0vG=G!*%yEqT=0tkB-2Y{n%(>-jZyvyfLVW|kbQ@xe*s@%w|@Wt

diff --git a/settings/repository/org.broad/tribble-100.xml b/settings/repository/org.broad/tribble-102.xml
similarity index 64%
rename from settings/repository/org.broad/tribble-100.xml
rename to settings/repository/org.broad/tribble-102.xml
index eaf39336a..0fdc55018 100644
--- a/settings/repository/org.broad/tribble-100.xml
+++ b/settings/repository/org.broad/tribble-102.xml
@@ -1,3 +1,3 @@
 <ivy-module version="1.0">
-    <info organisation="org.broad" module="tribble" revision="100" status="integration" publication="201006091154200" />
+    <info organisation="org.broad" module="tribble" revision="102" status="integration" publication="201006101154200" />
 </ivy-module>