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Changed column-key names to not have spaces, as GATKReport gets very upset about this. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5131 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kiran 2011-01-31 03:31:54 +00:00
parent 197c91e2fb
commit e26da9b047
1 changed files with 3 additions and 3 deletions
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6
java/src/org/broadinstitute/sting/playground/gatk/walkers/newvarianteval/evaluators/IndelStatistics.java
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@ -75,9 +75,9 @@ public class IndelStatistics extends VariantEvaluator {
COLUMN_KEYS[4] = "number_homozygous_insertions";
COLUMN_KEYS[5] = "number_het_deletions";
COLUMN_KEYS[6] = "number_homozygous_deletions";
COLUMN_KEYS[7] = "number of homozygous reference sites";
COLUMN_KEYS[8] = "number of complex events";
COLUMN_KEYS[9] = "number of long indels";
COLUMN_KEYS[7] = "number_of_homozygous_reference_sites";
COLUMN_KEYS[8] = "number_of_complex_events";
COLUMN_KEYS[9] = "number_of_long_indels";
for (int k=NUM_SCALAR_COLUMNS; k < NUM_SCALAR_COLUMNS+ 2*INDEL_SIZE_LIMIT+1; k++)
COLUMN_KEYS[k] = "indel_size_len"+Integer.valueOf(index2len(k));