From e03dfdb0ab318ed740f05a263f3fccee2c9d0521 Mon Sep 17 00:00:00 2001
From: Mark DePristo <depristo@broadinstitute.org>
Date: Thu, 25 Aug 2011 16:59:02 -0400
Subject: [PATCH] Automatic iteration field addition works properly.

---
 .../src/org/broadinstitute/sting/queue/util/QJobReport.scala  | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/public/scala/src/org/broadinstitute/sting/queue/util/QJobReport.scala b/public/scala/src/org/broadinstitute/sting/queue/util/QJobReport.scala
index c84f0b17a..a1fa10cd8 100644
--- a/public/scala/src/org/broadinstitute/sting/queue/util/QJobReport.scala
+++ b/public/scala/src/org/broadinstitute/sting/queue/util/QJobReport.scala
@@ -49,7 +49,7 @@ trait QJobReport extends Logging {
 
   def setRunInfo(info: JobRunInfo) {
     logger.info("info " + info)
-    reportFeatures = reportFeatures ++ Map(
+    reportFeatures = Map(
       "iteration" -> 1,
       "analysisName" -> self.analysisName,
       "jobName" -> QJobReport.workAroundSameJobNames(this),
@@ -58,7 +58,7 @@ trait QJobReport extends Logging {
       "doneTime" -> info.getDoneTime.getTime,
       "formattedStartTime" -> info.getFormattedStartTime,
       "formattedDoneTime" -> info.getFormattedDoneTime,
-      "runtime" -> info.getRuntimeInMs).mapValues((x:Any) => if (x != null) x.toString else "null")
+      "runtime" -> info.getRuntimeInMs).mapValues((x:Any) => if (x != null) x.toString else "null") ++ reportFeatures
 
 //    // handle the special case of iterations
 //    reportFeatures.get("iteration") match {