From 3b567d7a98ecc94eea1ee481f43790108619eb99 Mon Sep 17 00:00:00 2001
From: Phillip Dexheimer <phildex@broadinstitute.org>
Date: Wed, 18 Mar 2015 23:12:13 -0400
Subject: [PATCH] Fixed logging of 'out' command line parameter in VCF headers

---
 .../gatk/engine/io/stubs/VariantContextWriterStub.java          | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/public/gatk-engine/src/main/java/org/broadinstitute/gatk/engine/io/stubs/VariantContextWriterStub.java b/public/gatk-engine/src/main/java/org/broadinstitute/gatk/engine/io/stubs/VariantContextWriterStub.java
index c9202b03c..9597aec90 100644
--- a/public/gatk-engine/src/main/java/org/broadinstitute/gatk/engine/io/stubs/VariantContextWriterStub.java
+++ b/public/gatk-engine/src/main/java/org/broadinstitute/gatk/engine/io/stubs/VariantContextWriterStub.java
@@ -282,7 +282,7 @@ public class VariantContextWriterStub implements Stub<VariantContextWriter>, Var
      */
     @Override
     public String toString() {
-        return getClass().getName();
+        return (getOutputFile() == null) ? "(Stream)" : getOutputFile().getAbsolutePath();
     }
 
     /**