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ooops, no need to destroy old best's data explicitly, it will be done automatically of course 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2794 348d0f76-0448-11de-a6fe-93d51630548a
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asivache 2010-02-05 18:03:16 +00:00
parent 9f44018b7d
commit df0be25afb
1 changed files with 0 additions and 1 deletions
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java/src/org/broadinstitute/sting/gatk/walkers/indels/IntervalCleanerWalker.java
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@ -365,7 +365,6 @@ public class IntervalCleanerWalker extends LocusWindowWalker<Integer, Integer>
//logger.debug(consensus.str + " " + consensus.mismatchSum);
if ( bestConsensus == null || bestConsensus.mismatchSum > consensus.mismatchSum) {
if ( bestConsensus != null ) bestConsensus.readIndexes.clear(); // forget the old best consensus data, do not waste memory
bestConsensus = consensus;
//logger.debug(consensus.str + " " + consensus.mismatchSum);
} else {