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Fixing command line parsing to accept negative number arguments. Command line definitions must now start with a letter or underscore; previously, they could start with a digit. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3603 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
bthomas 2010-06-21 21:54:31 +00:00
parent 9d6a341d15
commit de9f1f575f
1 changed files with 2 additions and 2 deletions
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4
java/src/org/broadinstitute/sting/commandline/ParsingMethod.java
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@ -86,8 +86,8 @@ public abstract class ParsingMethod {
return argumentMatch;
}
public static ParsingMethod FullNameParsingMethod = new ParsingMethod(Pattern.compile("\\s*--([\\w\\.\\-]+)\\s*"),
public static ParsingMethod FullNameParsingMethod = new ParsingMethod(Pattern.compile("\\s*--([A-Za-z_][\\w\\-\\.]*)\\s*"),
ArgumentDefinitions.FullNameDefinitionMatcher) {};
public static ParsingMethod ShortNameParsingMethod = new ParsingMethod(Pattern.compile("\\s*-([\\w\\-]+)\\s*"),
public static ParsingMethod ShortNameParsingMethod = new ParsingMethod(Pattern.compile("\\s*-([A-Za-z_][\\w\\-]*)\\s*"),
ArgumentDefinitions.ShortNameDefinitionMatcher) {};
}