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Updated one integration test for indels

This commit is contained in:
Eric Banks 2012-01-25 19:18:51 -05:00
parent add6918f32
commit ddaf51a50f
1 changed files with 1 additions and 1 deletions
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public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
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@ -294,7 +294,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
WalkerTest.WalkerTestSpec spec4 = new WalkerTest.WalkerTestSpec(
baseCommandIndelsb37 + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -alleles " + validationDataLocation + "ALL.wgs.union_v2_chr20_100_110K.20101123.indels.sites.vcf -I " + validationDataLocation +
"phase1_GBR_realigned.chr20.100K-110K.bam -o %s -L 20:100,000-110,000", 1,
Arrays.asList("877de5b0cc61dc54636062df6399b978"));
Arrays.asList("1d1956fd7b0f0d30935674b2f5019860"));
executeTest("test MultiSample Phase1 indels with complicated records", spec4);
}