From dd1810140fc95e1a6d50d6fc0912bd9d26796d1f Mon Sep 17 00:00:00 2001
From: Mark DePristo <depristo@broadinstitute.org>
Date: Thu, 10 Nov 2011 13:27:32 -0500
Subject: [PATCH] -stratIntervals is optional

---
 .../sting/gatk/walkers/varianteval/VariantEvalWalker.java       | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalWalker.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalWalker.java
index 21c1610c7..4e4a1550d 100755
--- a/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalWalker.java
+++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalWalker.java
@@ -185,7 +185,7 @@ public class VariantEvalWalker extends RodWalker<Integer, Integer> implements Tr
     /**
      * File containing tribble-readable features for the IntervalStratificiation
      */
-    @Input(fullName="stratIntervals", shortName="stratIntervals", doc="File containing tribble-readable features for the IntervalStratificiation", required=true)
+    @Input(fullName="stratIntervals", shortName="stratIntervals", doc="File containing tribble-readable features for the IntervalStratificiation", required=false)
     protected IntervalBinding<Feature> intervalsFile = null;
 
     // Variables