diff --git a/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java b/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java index 155a539c7..888dc1e98 100755 --- a/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java +++ b/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java @@ -823,7 +823,8 @@ public class VariantContext implements Feature { // to enable tribble intergrati private void loadGenotypes() { if ( !hasAttribute(UNPARSED_GENOTYPE_MAP_KEY) ) { - genotypes = NO_GENOTYPES; + if ( genotypes == null ) + genotypes = NO_GENOTYPES; return; }