From db250f8d3e1562fbc02822ce93a9e5e5d62a6522 Mon Sep 17 00:00:00 2001
From: ebanks <ebanks@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Fri, 7 Aug 2009 06:08:02 +0000
Subject: [PATCH] Don't print if not in learning mode

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1389 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../gatk/walkers/variants/VariantFiltrationWalker.java         | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/variants/VariantFiltrationWalker.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/variants/VariantFiltrationWalker.java
index 1303d9341..832c7b884 100755
--- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/variants/VariantFiltrationWalker.java
+++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/variants/VariantFiltrationWalker.java
@@ -132,7 +132,8 @@ public class VariantFiltrationWalker extends LocusWalker<Integer, Integer> {
                 }
             }
 
-            swriters.get(STUDY_NAME).print("inDbSNP\tinHapMap\tisHet\n");
+            if (LEARNING)
+                swriters.get(STUDY_NAME).print("inDbSNP\tinHapMap\tisHet\n");
         } catch (FileNotFoundException e) {
             throw new StingException(String.format("Could not open file(s) for writing"));
         }