From daa5999489fea84502cafab7c6d5bea2a0e56bac Mon Sep 17 00:00:00 2001 From: Mark DePristo Date: Thu, 6 Oct 2011 08:16:25 -0700 Subject: [PATCH] Fixed typo in argument description --- .../sting/gatk/walkers/variantutils/VariantsToTable.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java index c44d84136..81d0c36ac 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java @@ -133,7 +133,7 @@ public class VariantsToTable extends RodWalker { /** * By default, this tool throws a UserException when it encounters a field without a value in some record. This - * is generally useful when you mistype -F CHRMO, so that you get a friendly warning about CHRMO not being + * is generally useful when you mistype -F CHROM, so that you get a friendly warning about CHRMO not being * found before the tool runs through 40M 1000G records. However, in some cases you genuinely want to allow such * fields (e.g., AC not being calculated for filtered records, if included). When provided, this argument * will cause VariantsToTable to write out NA values for missing fields instead of throwing an error.