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Using absolute paths in generated diff commands, to ease running them from any directory.

This commit is contained in:
Khalid Shakir 2014-02-27 04:43:29 +08:00
parent c163e6d0d2
commit da587d48ed
1 changed files with 1 additions and 1 deletions
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2
public/gatk-framework/src/test/java/org/broadinstitute/sting/MD5DB.java
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@ -120,7 +120,7 @@ public class MD5DB {
for ( String dir : Arrays.asList(GLOBAL_MD5_DB_DIR, LOCAL_MD5_DB_DIR)) { for ( String dir : Arrays.asList(GLOBAL_MD5_DB_DIR, LOCAL_MD5_DB_DIR)) {
File f = getFileForMD5(md5, dir); File f = getFileForMD5(md5, dir);
if ( f.exists() && f.canRead() ) if ( f.exists() && f.canRead() )
return f.getPath(); return f.getAbsolutePath();
} }
return valueIfNotFound; return valueIfNotFound;