From d73f2e95cc598915c4e232186b3ed535aa69b244 Mon Sep 17 00:00:00 2001
From: asivache <asivache@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Tue, 26 May 2009 21:06:44 +0000
Subject: [PATCH] refseq added to the list of known rod types

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@820 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java b/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java
index 7cdaf53b8..10f23df7b 100644
--- a/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java
+++ b/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java
@@ -10,6 +10,7 @@ import java.lang.reflect.InvocationTargetException;
 import java.lang.reflect.Method;
 
 import org.broadinstitute.sting.gatk.iterators.PushbackIterator;
+import org.broadinstitute.sting.playground.gatk.refdata.rodRefSeq;
 import org.broadinstitute.sting.utils.GenomeLoc;
 import org.broadinstitute.sting.utils.xReadLines;
 import org.broadinstitute.sting.utils.Utils;
@@ -61,6 +62,7 @@ public class ReferenceOrderedData<ROD extends ReferenceOrderedDatum> implements
         addModule("dbSNP", rodDbSNP.class);
         addModule("HapMapAlleleFrequencies", HapMapAlleleFrequenciesROD.class);
         addModule("SAMPileup", rodSAMPileup.class);
+        addModule("RefSeq", rodRefSeq.class);
         addModule("Table", TabularROD.class);
     }