diff --git a/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java b/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java index 7cdaf53b8..10f23df7b 100644 --- a/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java +++ b/java/src/org/broadinstitute/sting/gatk/refdata/ReferenceOrderedData.java @@ -10,6 +10,7 @@ import java.lang.reflect.InvocationTargetException; import java.lang.reflect.Method; import org.broadinstitute.sting.gatk.iterators.PushbackIterator; +import org.broadinstitute.sting.playground.gatk.refdata.rodRefSeq; import org.broadinstitute.sting.utils.GenomeLoc; import org.broadinstitute.sting.utils.xReadLines; import org.broadinstitute.sting.utils.Utils; @@ -61,6 +62,7 @@ public class ReferenceOrderedData implements addModule("dbSNP", rodDbSNP.class); addModule("HapMapAlleleFrequencies", HapMapAlleleFrequenciesROD.class); addModule("SAMPileup", rodSAMPileup.class); + addModule("RefSeq", rodRefSeq.class); addModule("Table", TabularROD.class); }