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Don't cry wolf: only one warning is now emitted, instead of tons of warnings. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1139 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
aaron 2009-07-01 13:50:37 +00:00
parent a3e0ec20c4
commit d58eeb7539
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/iterators/MergingSamRecordIterator2.java
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@ -55,7 +55,7 @@ public class MergingSamRecordIterator2 implements CloseableIterator<SAMRecord>,
private SAMRecord mNextRecord;
protected boolean initialized = false;
protected final Reads reads;
protected boolean warnedUserAboutSortOrder = false; // so we only warn the user once
protected static boolean warnedUserAboutSortOrder = false; // so we only warn the user once
/**
* Constructs a new merging iterator with the same set of readers and sort order as