zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

remove incorrect parentheses 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2211 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
aaron 2009-12-02 06:46:32 +00:00
parent 886c44303a
commit d487428468
1 changed files with 1 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
java/src/org/broadinstitute/sting/playground/gatk/walkers/papergenotyper/GATKPaperGenotyper.java
View File

@ -55,7 +55,7 @@ public class GATKPaperGenotyper extends LocusWalker<SimpleCall, Integer> impleme
byte pileupBase = bases[index];
for (char genotypeBase : genotype.toString().toCharArray())
if (genotypeBase == pileupBase)
likelihoods[genotype.ordinal()] += Math.log10(0.5 * ((1 - epsilon) + epsilon / 3));
likelihoods[genotype.ordinal()] += Math.log10(0.5 * (1 - epsilon) + epsilon / 3);
else
likelihoods[genotype.ordinal()] += Math.log10(epsilon / 3);
}