diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/PickSequenomProbes.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/PickSequenomProbes.java index 343a4c0d9..7e651c7d0 100755 --- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/PickSequenomProbes.java +++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/PickSequenomProbes.java @@ -68,7 +68,7 @@ public class PickSequenomProbes extends RefWalker long offset = context.getLocation().getStart(); char[] context_bases = ref.getBases(); - long true_offset = offset - 400; + long true_offset = offset - 200; for (long i = 0; i < 401; i++) { GenomeLoc loc = GenomeLocParser.parseGenomeLoc(context.getLocation().getContig() + ":" + true_offset + "-" + true_offset);