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Minor fixes to ITs

This commit is contained in:
Mark DePristo 2011-08-04 12:47:55 -04:00
parent f0d798d47c
commit d2078f09b2
2 changed files with 2 additions and 2 deletions
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2
public/java/test/org/broadinstitute/sting/gatk/walkers/recalibration/RecalibrationWalkersIntegrationTest.java
View File

@ -312,7 +312,7 @@ public class RecalibrationWalkersIntegrationTest extends WalkerTest {
WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec(
"-R " + b36KGReference +
" -B:dbsnp,vcf " +
" -B:dbsnp,vcf " + b36dbSNP129 +
" -T CountCovariates" +
" -I " + bam +
" -cov ReadGroupCovariate" +

2
public/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java
View File

@ -295,7 +295,7 @@ public class VariantEvalIntegrationTest extends WalkerTest {
" -B:evalBI,VCF " + validationDataLocation + "VariantEval/ALL.20100201.chr20.bi.sites.vcf" +
" -B:evalBC,VCF " + validationDataLocation + "VariantEval/ALL.20100201.chr20.bc.sites.vcf" +
" -noST -ST Novelty -o %s";
WalkerTestSpec spec = new WalkerTestSpec(extraArgs,1,Arrays.asList("79089484097614b7ab81bbc3ad3a892a"));
WalkerTestSpec spec = new WalkerTestSpec(extraArgs,1,Arrays.asList("79895904a3c2799e2e384a933d10f3fc"));
executeTestParallel("testMultipleEvalTracksWithoutGenotypes",spec);
}