Trivial removal of ununsed variable (mentioned in resolved JIRA entry)
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@ -57,8 +57,6 @@ public class GATKArgumentCollection {
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public GATKArgumentCollection() {
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}
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public Map<String, String> walkerArgs = new HashMap<String, String>();
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// parameters and their defaults
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@Input(fullName = "input_file", shortName = "I", doc = "SAM or BAM file(s)", required = false)
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public List<String> samFiles = new ArrayList<String>();
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