diff --git a/public/repo/net/sf/picard/1.111.1920/picard-1.111.1920.jar b/public/repo/net/sf/picard/1.111.1920/picard-1.111.1920.jar
deleted file mode 100644
index 4933ed477..000000000
Binary files a/public/repo/net/sf/picard/1.111.1920/picard-1.111.1920.jar and /dev/null differ
diff --git a/public/repo/net/sf/sam/1.111.1920/sam-1.111.1920.jar b/public/repo/net/sf/sam/1.111.1920/sam-1.111.1920.jar
deleted file mode 100644
index 7f6839e1b..000000000
Binary files a/public/repo/net/sf/sam/1.111.1920/sam-1.111.1920.jar and /dev/null differ
diff --git a/public/repo/org/broad/tribble/1.111.1920/tribble-1.111.1920.jar b/public/repo/org/broad/tribble/1.111.1920/tribble-1.111.1920.jar
deleted file mode 100644
index 804db912a..000000000
Binary files a/public/repo/org/broad/tribble/1.111.1920/tribble-1.111.1920.jar and /dev/null differ
diff --git a/public/repo/org/broad/tribble/1.111.1920/tribble-1.111.1920.pom b/public/repo/org/broad/tribble/1.111.1920/tribble-1.111.1920.pom
deleted file mode 100644
index af3cf6095..000000000
--- a/public/repo/org/broad/tribble/1.111.1920/tribble-1.111.1920.pom
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-    <groupId>org.broad</groupId>
-    <artifactId>tribble</artifactId>
-    <version>1.111.1920</version>
-    <name>tribble</name>
-    <dependencies>
-        <dependency>
-            <groupId>net.sf</groupId>
-            <artifactId>sam</artifactId>
-            <version>1.111.1920</version>
-        </dependency>
-    </dependencies>
-</project>
diff --git a/public/repo/org/broadinstitute/variant/1.111.1920/variant-1.111.1920.jar b/public/repo/org/broadinstitute/variant/1.111.1920/variant-1.111.1920.jar
deleted file mode 100644
index b0447f3df..000000000
Binary files a/public/repo/org/broadinstitute/variant/1.111.1920/variant-1.111.1920.jar and /dev/null differ
diff --git a/public/repo/org/broadinstitute/variant/1.111.1920/variant-1.111.1920.pom b/public/repo/org/broadinstitute/variant/1.111.1920/variant-1.111.1920.pom
deleted file mode 100644
index ca20e97d9..000000000
--- a/public/repo/org/broadinstitute/variant/1.111.1920/variant-1.111.1920.pom
+++ /dev/null
@@ -1,31 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-    <groupId>org.broadinstitute</groupId>
-    <artifactId>variant</artifactId>
-    <version>1.111.1920</version>
-    <name>variant</name>
-    <dependencies>
-        <dependency>
-            <groupId>org.broad</groupId>
-            <artifactId>tribble</artifactId>
-            <version>1.111.1920</version>
-        </dependency>
-        <dependency>
-            <groupId>net.sf</groupId>
-            <artifactId>sam</artifactId>
-            <version>1.111.1920</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-jexl</artifactId>
-            <version>2.1.1</version>
-        </dependency>
-        <!-- TODO: This artifact is only in the Sting local repo, not in central, yet. -->
-        <dependency>
-            <groupId>com.google.code.cofoja</groupId>
-            <artifactId>cofoja</artifactId>
-            <version>1.0-r139</version>
-        </dependency>
-    </dependencies>
-</project>
diff --git a/public/repo/picard/picard/1.112.1452/picard-1.112.1452.jar b/public/repo/picard/picard/1.112.1452/picard-1.112.1452.jar
new file mode 100644
index 000000000..c56a3a92d
Binary files /dev/null and b/public/repo/picard/picard/1.112.1452/picard-1.112.1452.jar differ
diff --git a/public/repo/net/sf/picard/1.111.1920/picard-1.111.1920.pom b/public/repo/picard/picard/1.112.1452/picard-1.112.1452.pom
similarity index 69%
rename from public/repo/net/sf/picard/1.111.1920/picard-1.111.1920.pom
rename to public/repo/picard/picard/1.112.1452/picard-1.112.1452.pom
index 14e5c9c88..bd617dde1 100644
--- a/public/repo/net/sf/picard/1.111.1920/picard-1.111.1920.pom
+++ b/public/repo/picard/picard/1.112.1452/picard-1.112.1452.pom
@@ -1,25 +1,15 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
     <modelVersion>4.0.0</modelVersion>
-    <groupId>net.sf</groupId>
+    <groupId>picard</groupId>
     <artifactId>picard</artifactId>
-    <version>1.111.1920</version>
+    <version>1.112.1452</version>
     <name>picard</name>
     <dependencies>
         <dependency>
-            <groupId>net.sf</groupId>
-            <artifactId>sam</artifactId>
-            <version>1.111.1920</version>
-        </dependency>
-        <dependency>
-            <groupId>org.broadinstitute</groupId>
-            <artifactId>variant</artifactId>
-            <version>1.111.1920</version>
-        </dependency>
-        <dependency>
-            <groupId>org.broad</groupId>
-            <artifactId>tribble</artifactId>
-            <version>1.111.1920</version>
+            <groupId>samtools</groupId>
+            <artifactId>htsjdk</artifactId>
+            <version>1.112.1452</version>
         </dependency>
         <!-- TODO: Picard is using a custom zip with just ant's BZip2 classes. See also: http://www.kohsuke.org/bzip2 -->
         <dependency>
diff --git a/public/repo/samtools/htsjdk/1.112.1452/htsjdk-1.112.1452.jar b/public/repo/samtools/htsjdk/1.112.1452/htsjdk-1.112.1452.jar
new file mode 100644
index 000000000..80b759ec7
Binary files /dev/null and b/public/repo/samtools/htsjdk/1.112.1452/htsjdk-1.112.1452.jar differ
diff --git a/public/repo/net/sf/sam/1.111.1920/sam-1.111.1920.pom b/public/repo/samtools/htsjdk/1.112.1452/htsjdk-1.112.1452.pom
similarity index 64%
rename from public/repo/net/sf/sam/1.111.1920/sam-1.111.1920.pom
rename to public/repo/samtools/htsjdk/1.112.1452/htsjdk-1.112.1452.pom
index 266aa93dd..0b8c2db4d 100644
--- a/public/repo/net/sf/sam/1.111.1920/sam-1.111.1920.pom
+++ b/public/repo/samtools/htsjdk/1.112.1452/htsjdk-1.112.1452.pom
@@ -1,10 +1,10 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
     <modelVersion>4.0.0</modelVersion>
-    <groupId>net.sf</groupId>
-    <artifactId>sam</artifactId>
-    <version>1.111.1920</version>
-    <name>sam-jdk</name>
+    <groupId>samtools</groupId>
+    <artifactId>htsjdk</artifactId>
+    <version>1.112.1452</version>
+    <name>htsjdk</name>
     <dependencies>
         <dependency>
             <groupId>org.testng</groupId>
@@ -17,5 +17,11 @@
             <artifactId>snappy-java</artifactId>
             <version>1.0.3-rc3</version>
         </dependency>
+        <!-- TODO: This artifact is only in the Sting local repo, not in central, yet. -->
+        <dependency>
+            <groupId>com.google.code.cofoja</groupId>
+            <artifactId>cofoja</artifactId>
+            <version>1.0-r139</version>
+        </dependency>
     </dependencies>
 </project>