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More package-level documentation. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1030 348d0f76-0448-11de-a6fe-93d51630548a
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hanna 2009-06-17 16:28:45 +00:00
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java/src/org/broadinstitute/sting/gatk/executive/package.html 100644
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN">
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Manages individual analyses by shattering data, pushing individual shards to the traversal engines, and gathering results and presenting them to the user.
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN">
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Tools for iterating over different views of GATK data.
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN">
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Provides map/reduce application framework highly optimized for
analysis of sequencing data.
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN">
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Reads and preprocesses the various types of data represented by the
GATK.
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN">
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Runs the desired analysis on the smallest meaningful subset of the
dataset. Traditionally, the smallest subset is either an individual
locus or read.
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