From cb7ad01202615ffcf8799e6671b6eca64cfbe440 Mon Sep 17 00:00:00 2001
From: Joel Thibault <thibault@broadinstitute.org>
Date: Fri, 14 Feb 2014 12:34:08 -0500
Subject: [PATCH] Re-enable the relevant tests

---
 .../utils/recalibration/RecalibrationReportUnitTest.java      | 2 +-
 .../sting/utils/recalibration/RepeatCovariatesUnitTest.java   | 4 ++--
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RecalibrationReportUnitTest.java b/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RecalibrationReportUnitTest.java
index 256cbbea4..d3c3ffe97 100644
--- a/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RecalibrationReportUnitTest.java
+++ b/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RecalibrationReportUnitTest.java
@@ -77,7 +77,7 @@ public class RecalibrationReportUnitTest {
         return new RecalDatum((long)nObservations, (double)nErrors, (byte)qual);
     }
 
-    @Test(enabled = false)
+    @Test
     public void testOutput() {
         final int length = 100;
 
diff --git a/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RepeatCovariatesUnitTest.java b/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RepeatCovariatesUnitTest.java
index 85c8e3ea1..74cb2a1eb 100644
--- a/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RepeatCovariatesUnitTest.java
+++ b/protected/gatk-protected/src/test/java/org/broadinstitute/sting/utils/recalibration/RepeatCovariatesUnitTest.java
@@ -89,7 +89,7 @@ public class RepeatCovariatesUnitTest {
     }
 
 
-    @Test(enabled = true)
+    @Test
     public void testFindNumberOfRepetitions() {
         // First, test logic to compute number of repetitions of a substring on a given string.
         int result = GATKVariantContextUtils.findNumberofRepetitions("AC".getBytes(), "ACAC".getBytes(), true);
@@ -142,7 +142,7 @@ public class RepeatCovariatesUnitTest {
      * Build synthetic reads with random content made up of tandem repeats, record computed Repeat Unit and # repeats and see if
      * they match with read context
      */
-    @Test(enabled = false)
+    @Test
     public void testManyObservations() {
         final int NUM_UNITS = 10;
         final int MAX_REPEAT_UNIT_LENGTH = RAC.MAX_STR_UNIT_LENGTH;