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Must close the writer to flush the cache 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4726 348d0f76-0448-11de-a6fe-93d51630548a
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ebanks 2010-11-24 04:33:08 +00:00
parent 816c33c821
commit caf2c21f61
1 changed files with 1 additions and 0 deletions
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java/src/org/broadinstitute/sting/gatk/walkers/variantutils/LeftAlignVariants.java
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@ -90,6 +90,7 @@ public class LeftAlignVariants extends RodWalker<Integer, Integer> {
} }
public void onTraversalDone(Integer result) { public void onTraversalDone(Integer result) {
writer.close();
System.out.println(result + " variants were aligned"); System.out.println(result + " variants were aligned");
} }