From c8b1c92a6ca2d99e8050d04bb30778a2d4008099 Mon Sep 17 00:00:00 2001
From: Mauricio Carneiro <carneiro@broadinstitute.org>
Date: Mon, 12 Dec 2011 10:55:41 -0500
Subject: [PATCH] Updating the other half of the PPP

---
 .../sting/queue/qscripts/PacbioProcessingPipeline.scala          | 1 -
 1 file changed, 1 deletion(-)

diff --git a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala
index 6f5dae2f8..1d3fb2622 100755
--- a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala
+++ b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/PacbioProcessingPipeline.scala
@@ -177,7 +177,6 @@ class PacbioProcessingPipeline extends QScript {
   }
 
   case class analyzeCovariates (inRecalFile: File, outPath: String) extends AnalyzeCovariates {
-    this.resources = R
     this.recal_file = inRecalFile
     this.output_dir = outPath
     this.analysisName = queueLogDir + inRecalFile + ".analyze_covariates"